IL_4V61_174
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- CUAAAUGACCGCUCAGUGAUAAAG*CGAAGAUGAACG
- Length
- 36 nucleotides
- Bulged bases
- 4V61|1|BA|U|1040, 4V61|1|BA|C|1048, 4V61|1|BA|G|1050, 4V61|1|BA|A|1053, 4V61|1|BA|A|1154, 4V61|1|BA|A|1155, 4V61|1|BA|G|1156, 4V61|1|BA|A|1157, 4V61|1|BA|U|1158, 4V61|1|BA|C|1162
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V61|1|BA|C|1035
4V61|1|BA|U|1036
4V61|1|BA|A|1037
4V61|1|BA|A|1038
4V61|1|BA|A|1039
4V61|1|BA|U|1040
4V61|1|BA|G|1041
4V61|1|BA|A|1042
4V61|1|BA|C|1043
4V61|1|BA|C|1044
4V61|1|BA|G|1045
4V61|1|BA|C|1046
4V61|1|BA|U|1047
4V61|1|BA|C|1048
4V61|1|BA|A|1049
4V61|1|BA|G|1050
4V61|1|BA|U|1051
4V61|1|BA|G|1052
4V61|1|BA|A|1053
4V61|1|BA|U|1054
4V61|1|BA|A|1055
4V61|1|BA|A|1056
4V61|1|BA|A|1057
4V61|1|BA|G|1058
*
4V61|1|BA|C|1152
4V61|1|BA|G|1153
4V61|1|BA|A|1154
4V61|1|BA|A|1155
4V61|1|BA|G|1156
4V61|1|BA|A|1157
4V61|1|BA|U|1158
4V61|1|BA|G|1159
4V61|1|BA|A|1160
4V61|1|BA|A|1161
4V61|1|BA|C|1162
4V61|1|BA|G|1163
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B6
- Ribosomal Protein L36
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- Ribosomal Protein L3
- Chain BI
- Ribosomal Protein L6
- Chain BL
- Ribosomal Protein L13
- Chain BO
- Ribosomal Protein L16
- Chain BS
- Ribosomal Protein L20
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