IL_4V61_175

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GAGGUAGGGGU*GCUCUUGCGC

Length

21 nucleotides

Bulged bases

4V61|1|BA|G|1061

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|G|1059
4V61|1|BA|A|1060
4V61|1|BA|G|1061
4V61|1|BA|G|1062
4V61|1|BA|U|1063
4V61|1|BA|A|1064
4V61|1|BA|G|1065
4V61|1|BA|G|1066
4V61|1|BA|G|1067
4V61|1|BA|G|1068
4V61|1|BA|U|1069
*
4V61|1|BA|G|1142
4V61|1|BA|C|1143
4V61|1|BA|U|1144
4V61|1|BA|C|1145
4V61|1|BA|U|1146
4V61|1|BA|U|1147
4V61|1|BA|G|1148
4V61|1|BA|C|1149
4V61|1|BA|G|1150
4V61|1|BA|C|1151

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B6

Ribosomal Protein L36

Chain BI

Ribosomal Protein L6

Chain BO

Ribosomal Protein L16