IL_4V61_176

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GGA*UUGAAAGAGUGCGUAAUAGCUCAC

Length

27 nucleotides

Bulged bases

4V61|1|BA|A|1116

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|G|1083
4V61|1|BA|G|1084
4V61|1|BA|A|1085
*
4V61|1|BA|U|1109
4V61|1|BA|U|1110
4V61|1|BA|G|1111
4V61|1|BA|A|1112
4V61|1|BA|A|1113
4V61|1|BA|A|1114
4V61|1|BA|G|1115
4V61|1|BA|A|1116
4V61|1|BA|G|1117
4V61|1|BA|U|1118
4V61|1|BA|G|1119
4V61|1|BA|C|1120
4V61|1|BA|G|1121
4V61|1|BA|U|1122
4V61|1|BA|A|1123
4V61|1|BA|A|1124
4V61|1|BA|U|1125
4V61|1|BA|A|1126
4V61|1|BA|G|1127
4V61|1|BA|C|1128
4V61|1|BA|U|1129
4V61|1|BA|C|1130
4V61|1|BA|A|1131
4V61|1|BA|C|1132

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B6

Ribosomal Protein L36

Chain BI

Ribosomal Protein L6

Chain BK

Ribosomal Protein L11