IL_4V61_177

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

AGGUUUG*CCACCCU

Length

14 nucleotides

Bulged bases

4V61|1|BA|U|1089

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|A|1085
4V61|1|BA|G|1086
4V61|1|BA|G|1087
4V61|1|BA|U|1088
4V61|1|BA|U|1089
4V61|1|BA|U|1090
4V61|1|BA|G|1091
*
4V61|1|BA|C|1103
4V61|1|BA|C|1104
4V61|1|BA|A|1105
4V61|1|BA|C|1106
4V61|1|BA|C|1107
4V61|1|BA|C|1108
4V61|1|BA|U|1109

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BK

Ribosomal Protein L11

Chain BO

Ribosomal Protein L16