IL_4V61_201
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- CCUCU*AAG
- Length
- 8 nucleotides
- Bulged bases
- 4V61|1|BA|A|2744
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V61_201 not in the Motif Atlas
- Homologous match to IL_7A0S_095
- Geometric discrepancy: 0.3517
- The information below is about IL_7A0S_095
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.13
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 23
Unit IDs
4V61|1|BA|C|2697
4V61|1|BA|C|2698
4V61|1|BA|U|2699
4V61|1|BA|C|2700
4V61|1|BA|U|2701
*
4V61|1|BA|A|2743
4V61|1|BA|A|2744
4V61|1|BA|G|2745
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BC
- 4.8S rRNA
- Chain BF
- Ribosomal Protein L3
- Chain BM
- Ribosomal Protein L14
- Chain BP
- Ribosomal Protein L17
- Chain BR
- Ribosomal Protein L19
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