IL_4V63_220
3D structure
- PDB id
- 4V63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural basis for translation termination on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.21 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 4V63|1|CA|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V63_220 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.3508
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
4V63|1|CA|C|1060
4V63|1|CA|G|1061
*
4V63|1|CA|C|1195
4V63|1|CA|U|1196
4V63|1|CA|G|1197
Current chains
- Chain CA
- 16S RRNA
Nearby chains
- Chain CC
- 30S ribosomal protein S3
- Chain CE
- 30S ribosomal protein S5
- Chain CI
- 30S ribosomal protein S9
- Chain CJ
- 30S ribosomal protein S10
- Chain CN
- 30S ribosomal protein S14
- Chain CV
- mRNA
- Chain CX
- Peptide chain release factor 1
Coloring options: