IL_4V64_328
3D structure
- PDB id
- 4V64 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- AA*UACU
- Length
- 6 nucleotides
- Bulged bases
- 4V64|1|DB|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V64_328 not in the Motif Atlas
- Homologous match to IL_7RQB_081
- Geometric discrepancy: 0.1118
- The information below is about IL_7RQB_081
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_42622.4
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V64|1|DB|A|2070
4V64|1|DB|A|2071
*
4V64|1|DB|U|2438
4V64|1|DB|A|2439
4V64|1|DB|C|2440
4V64|1|DB|U|2441
Current chains
- Chain DB
- 23S ribosomal RNA
Nearby chains
- Chain DC
- 50S ribosomal protein L2
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