IL_4V65_016

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|U|409
4V65|1|A1|G|410
4V65|1|A1|A|411
4V65|1|A1|A|412
4V65|1|A1|G|413
4V65|1|A1|A|414
4V65|1|A1|A|415
4V65|1|A1|G|416
4V65|1|A1|G|417
*
4V65|1|A1|U|426
4V65|1|A1|U|427
4V65|1|A1|G|428
4V65|1|A1|U|429
4V65|1|A1|A|430
4V65|1|A1|A|431
4V65|1|A1|A|432
4V65|1|A1|G|433

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AO

30S ribosomal protein S3

Chain AR

30S ribosomal protein S4