IL_4V65_018

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGAGGAAG*UGACGUUAC

Length

17 nucleotides

Bulged bases

4V65|1|A1|U|485

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|446
4V65|1|A1|G|447
4V65|1|A1|A|448
4V65|1|A1|G|449
4V65|1|A1|G|450
4V65|1|A1|A|451
4V65|1|A1|A|452
4V65|1|A1|G|453
*
4V65|1|A1|U|480
4V65|1|A1|G|481
4V65|1|A1|A|482
4V65|1|A1|C|483
4V65|1|A1|G|484
4V65|1|A1|U|485
4V65|1|A1|U|486
4V65|1|A1|A|487
4V65|1|A1|C|488

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AI

30S ribosomal protein S16

Chain AR

30S ribosomal protein S4