IL_4V65_026

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UGAAAUCC*GAACUG

Length

14 nucleotides

Bulged bases

4V65|1|A1|U|632

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|U|605
4V65|1|A1|G|606
4V65|1|A1|A|607
4V65|1|A1|A|608
4V65|1|A1|A|609
4V65|1|A1|U|610
4V65|1|A1|C|611
4V65|1|A1|C|612
*
4V65|1|A1|G|628
4V65|1|A1|A|629
4V65|1|A1|A|630
4V65|1|A1|C|631
4V65|1|A1|U|632
4V65|1|A1|G|633

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AI

30S ribosomal protein S16

Chain AJ

30S ribosomal protein S17

Chain AR

30S ribosomal protein S4

Chain AV

30S ribosomal protein S8