IL_4V65_038
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GGC*GUCAUC
- Length
- 9 nucleotides
- Bulged bases
- 4V65|1|A1|A|1201
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V65_038 not in the Motif Atlas
- Geometric match to IL_4V88_465
- Geometric discrepancy: 0.33
- The information below is about IL_4V88_465
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V65|1|A1|G|1057
4V65|1|A1|G|1058
4V65|1|A1|C|1059
*
4V65|1|A1|G|1198
4V65|1|A1|U|1199
4V65|1|A1|C|1200
4V65|1|A1|A|1201
4V65|1|A1|U|1202
4V65|1|A1|C|1203
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AG
- 30S ribosomal protein S14
- Chain AO
- 30S ribosomal protein S3
- Chain AX
- 30S ribosomal protein S10
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