IL_4V65_071

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGGGUAG*CGAAUACC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|856
4V65|1|BB|G|857
4V65|1|BB|G|858
4V65|1|BB|G|859
4V65|1|BB|U|860
4V65|1|BB|A|861
4V65|1|BB|G|862
*
4V65|1|BB|C|915
4V65|1|BB|G|916
4V65|1|BB|A|917
4V65|1|BB|A|918
4V65|1|BB|U|919
4V65|1|BB|A|920
4V65|1|BB|C|921
4V65|1|BB|C|922

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BA

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L16

Chain BP

50S ribosomal protein L27

Chain BR

50S ribosomal protein L30