IL_4V65_075

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CGGCAAG*CAACCCG

Length

14 nucleotides

Bulged bases

4V65|1|BB|A|878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|C|873
4V65|1|BB|G|874
4V65|1|BB|G|875
4V65|1|BB|C|876
4V65|1|BB|A|877
4V65|1|BB|A|878
4V65|1|BB|G|879
*
4V65|1|BB|C|898
4V65|1|BB|A|899
4V65|1|BB|A|900
4V65|1|BB|C|901
4V65|1|BB|C|902
4V65|1|BB|C|903
4V65|1|BB|G|904

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BA

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L16