IL_4V65_078

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UCCCAAAGUC*GCA

Length

13 nucleotides

Bulged bases

4V65|1|BB|C|1007, 4V65|1|BB|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|U|1004
4V65|1|BB|C|1005
4V65|1|BB|C|1006
4V65|1|BB|C|1007
4V65|1|BB|A|1008
4V65|1|BB|A|1009
4V65|1|BB|A|1010
4V65|1|BB|G|1011
4V65|1|BB|U|1012
4V65|1|BB|C|1013
*
4V65|1|BB|G|1149
4V65|1|BB|C|1150
4V65|1|BB|A|1151

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B6

50S ribosomal protein L13

Chain BJ

50S ribosomal protein L20