IL_4V65_085

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UGUAAGC*GUAUCA

Length

13 nucleotides

Bulged bases

4V65|1|BB|A|1205, 4V65|1|BB|A|1241

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|U|1201
4V65|1|BB|G|1202
4V65|1|BB|U|1203
4V65|1|BB|A|1204
4V65|1|BB|A|1205
4V65|1|BB|G|1206
4V65|1|BB|C|1207
*
4V65|1|BB|G|1239
4V65|1|BB|U|1240
4V65|1|BB|A|1241
4V65|1|BB|U|1242
4V65|1|BB|C|1243
4V65|1|BB|A|1244

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B1

50S ribosomal protein L4

Chain BE

50S ribosomal protein L15

Chain BJ

50S ribosomal protein L20