IL_4V65_086

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CUGCGAAGGUGUGCU*GGCAUGCUGGAG

Length

27 nucleotides

Bulged bases

4V65|1|BB|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|C|1208
4V65|1|BB|U|1209
4V65|1|BB|G|1210
4V65|1|BB|C|1211
4V65|1|BB|G|1212
4V65|1|BB|A|1213
4V65|1|BB|A|1214
4V65|1|BB|G|1215
4V65|1|BB|G|1216
4V65|1|BB|U|1217
4V65|1|BB|G|1218
4V65|1|BB|U|1219
4V65|1|BB|G|1220
4V65|1|BB|C|1221
4V65|1|BB|U|1222
*
4V65|1|BB|G|1227
4V65|1|BB|G|1228
4V65|1|BB|C|1229
4V65|1|BB|A|1230
4V65|1|BB|U|1231
4V65|1|BB|G|1232
4V65|1|BB|C|1233
4V65|1|BB|U|1234
4V65|1|BB|G|1235
4V65|1|BB|G|1236
4V65|1|BB|A|1237
4V65|1|BB|G|1238

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BE

50S ribosomal protein L15

Chain BJ

50S ribosomal protein L20

Chain BK

50S ribosomal protein L21