IL_4V65_108

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGGAGGCU*GCCGACCUUGAAAUACC

Length

25 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|2123
4V65|1|BB|G|2124
4V65|1|BB|G|2125
4V65|1|BB|A|2126
4V65|1|BB|G|2127
4V65|1|BB|G|2128
4V65|1|BB|C|2129
4V65|1|BB|U|2130
*
4V65|1|BB|G|2159
4V65|1|BB|C|2160
4V65|1|BB|C|2161
4V65|1|BB|G|2162
4V65|1|BB|A|2163
4V65|1|BB|C|2164
4V65|1|BB|C|2165
4V65|1|BB|U|2166
4V65|1|BB|U|2167
4V65|1|BB|G|2168
4V65|1|BB|A|2169
4V65|1|BB|A|2170
4V65|1|BB|A|2171
4V65|1|BB|U|2172
4V65|1|BB|A|2173
4V65|1|BB|C|2174
4V65|1|BB|C|2175

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BZ

50S ribosomal protein L1P