IL_4V65_138

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

UACAAAGAG*CUCAUAAAG

Length

18 nucleotides

Bulged bases

4V65|1|A1|U|1286

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|U|1247
4V65|1|A1|A|1248
4V65|1|A1|C|1249
4V65|1|A1|A|1250
4V65|1|A1|A|1251
4V65|1|A1|A|1252
4V65|1|A1|G|1253
4V65|1|A1|A|1254
4V65|1|A1|G|1255
*
4V65|1|A1|C|1282
4V65|1|A1|U|1283
4V65|1|A1|C|1284
4V65|1|A1|A|1285
4V65|1|A1|U|1286
4V65|1|A1|A|1287
4V65|1|A1|A|1288
4V65|1|A1|A|1289
4V65|1|A1|G|1290

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S14

Chain AU

30S ribosomal protein S7

Chain AW

30S ribosomal protein S9