IL_4V65_141

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUUGCAAAAG*CACUUUGUGAU

Length

21 nucleotides

Bulged bases

4V65|1|A1|A|1428

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|1423
4V65|1|A1|U|1424
4V65|1|A1|U|1425
4V65|1|A1|G|1426
4V65|1|A1|C|1427
4V65|1|A1|A|1428
4V65|1|A1|A|1429
4V65|1|A1|A|1430
4V65|1|A1|A|1431
4V65|1|A1|G|1432
*
4V65|1|A1|C|1467
4V65|1|A1|A|1468
4V65|1|A1|C|1469
4V65|1|A1|U|1470
4V65|1|A1|U|1471
4V65|1|A1|U|1472
4V65|1|A1|G|1473
4V65|1|A1|U|1474
4V65|1|A1|G|1475
4V65|1|A1|A|1476
4V65|1|A1|U|1477

Current chains

Chain A1

16S rRNA

Nearby chains

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain BD

50S ribosomal protein L14