IL_4V65_142

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGUAGCUUAAC*GAGGGCGCU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|1438
4V65|1|A1|G|1439
4V65|1|A1|U|1440
4V65|1|A1|A|1441
4V65|1|A1|G|1442
4V65|1|A1|C|1443
4V65|1|A1|U|1444
4V65|1|A1|U|1445
4V65|1|A1|A|1446
4V65|1|A1|A|1447
4V65|1|A1|C|1448
*
4V65|1|A1|G|1455
4V65|1|A1|A|1456
4V65|1|A1|G|1457
4V65|1|A1|G|1458
4V65|1|A1|G|1459
4V65|1|A1|C|1460
4V65|1|A1|G|1461
4V65|1|A1|C|1462
4V65|1|A1|U|1463

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S20

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain BI

50S ribosomal protein L19