IL_4V65_148

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAGAACUCGGGUGAAGGAA*UCUCCACCCGAGACU

Length

34 nucleotides

Bulged bases

4V65|1|BB|U|1657, 4V65|1|BB|C|1999

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|1651
4V65|1|BB|A|1652
4V65|1|BB|G|1653
4V65|1|BB|A|1654
4V65|1|BB|A|1655
4V65|1|BB|C|1656
4V65|1|BB|U|1657
4V65|1|BB|C|1658
4V65|1|BB|G|1659
4V65|1|BB|G|1660
4V65|1|BB|G|1661
4V65|1|BB|U|1662
4V65|1|BB|G|1663
4V65|1|BB|A|1664
4V65|1|BB|A|1665
4V65|1|BB|G|1666
4V65|1|BB|G|1667
4V65|1|BB|A|1668
4V65|1|BB|A|1669
*
4V65|1|BB|U|1993
4V65|1|BB|C|1994
4V65|1|BB|U|1995
4V65|1|BB|C|1996
4V65|1|BB|C|1997
4V65|1|BB|A|1998
4V65|1|BB|C|1999
4V65|1|BB|C|2000
4V65|1|BB|C|2001
4V65|1|BB|G|2002
4V65|1|BB|A|2003
4V65|1|BB|G|2004
4V65|1|BB|A|2005
4V65|1|BB|C|2006
4V65|1|BB|U|2007

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BD

50S ribosomal protein L14

Chain BG

50S ribosomal protein L17

Chain BI

50S ribosomal protein L19

Chain BT

50S ribosomal protein L32

Chain BY

50S ribosomal protein L3