IL_4V65_163

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUAGAGG*CUGGAC

Length

13 nucleotides

Bulged bases

4V65|1|A1|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|661
4V65|1|A1|U|662
4V65|1|A1|A|663
4V65|1|A1|G|664
4V65|1|A1|A|665
4V65|1|A1|G|666
4V65|1|A1|G|667
*
4V65|1|A1|C|739
4V65|1|A1|U|740
4V65|1|A1|G|741
4V65|1|A1|G|742
4V65|1|A1|A|743
4V65|1|A1|C|744

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AH

30S ribosomal protein S15

Chain AK

30S ribosomal protein S18

Chain AT

30S ribosomal protein S6