IL_4V65_173

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CGGUAAG*CGUUAUAACCG

Length

18 nucleotides

Bulged bases

4V65|1|BB|U|99, 4V65|1|BB|U|100, 4V65|1|BB|A|101

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|C|79
4V65|1|BB|G|80
4V65|1|BB|G|81
4V65|1|BB|U|82
4V65|1|BB|A|83
4V65|1|BB|A|84
4V65|1|BB|G|85
*
4V65|1|BB|C|97
4V65|1|BB|G|98
4V65|1|BB|U|99
4V65|1|BB|U|100
4V65|1|BB|A|101
4V65|1|BB|U|102
4V65|1|BB|A|103
4V65|1|BB|A|104
4V65|1|BB|C|105
4V65|1|BB|C|106
4V65|1|BB|G|107

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BO

50S ribosomal protein L24

Chain BQ

50S ribosomal protein L29