IL_4V65_178

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

AGAAG*CCUGCUU

Length

12 nucleotides

Bulged bases

4V65|1|BB|U|1559

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|A|1431
4V65|1|BB|G|1432
4V65|1|BB|A|1433
4V65|1|BB|A|1434
4V65|1|BB|G|1435
*
4V65|1|BB|C|1557
4V65|1|BB|C|1558
4V65|1|BB|U|1559
4V65|1|BB|G|1560
4V65|1|BB|C|1561
4V65|1|BB|U|1562
4V65|1|BB|U|1563

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L2