IL_4V65_182

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

AACUGAG*CGAGAUGAGUU

Length

18 nucleotides

Bulged bases

4V65|1|BB|G|2777, 4V65|1|BB|U|2779, 4V65|1|BB|G|2780, 4V65|1|BB|A|2781

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|A|2634
4V65|1|BB|A|2635
4V65|1|BB|C|2636
4V65|1|BB|U|2637
4V65|1|BB|G|2638
4V65|1|BB|A|2639
4V65|1|BB|G|2640
*
4V65|1|BB|C|2774
4V65|1|BB|G|2775
4V65|1|BB|A|2776
4V65|1|BB|G|2777
4V65|1|BB|A|2778
4V65|1|BB|U|2779
4V65|1|BB|G|2780
4V65|1|BB|A|2781
4V65|1|BB|G|2782
4V65|1|BB|U|2783
4V65|1|BB|U|2784

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B6

50S ribosomal protein L13

Chain BY

50S ribosomal protein L3