3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GCUGCAU*AUGGC
Length
12 nucleotides
Bulged bases
4V66|1|A1|C|1054
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|G|1050
4V66|1|A1|C|1051
4V66|1|A1|U|1052
4V66|1|A1|G|1053
4V66|1|A1|C|1054
4V66|1|A1|A|1055
4V66|1|A1|U|1056
*
4V66|1|A1|A|1204
4V66|1|A1|U|1205
4V66|1|A1|G|1206
4V66|1|A1|G|1207
4V66|1|A1|C|1208

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AA
Transfer RNA; tRNA
Chain AG
30S ribosomal protein S14
Chain AM
mRNA model
Chain AO
30S ribosomal protein S3
Chain AX
30S ribosomal protein S10

Coloring options:

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