3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GGCAGGUU*GGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUU
Length
48 nucleotides
Bulged bases
4V66|1|BB|U|744, 4V66|1|BB|U|747
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|BB|G|696
4V66|1|BB|G|697
4V66|1|BB|C|698
4V66|1|BB|A|699
4V66|1|BB|G|700
4V66|1|BB|G|701
4V66|1|BB|U|702
4V66|1|BB|U|703
*
4V66|1|BB|G|728
4V66|1|BB|G|729
4V66|1|BB|A|730
4V66|1|BB|C|731
4V66|1|BB|C|732
4V66|1|BB|G|733
4V66|1|BB|A|734
4V66|1|BB|A|735
4V66|1|BB|C|736
4V66|1|BB|C|737
4V66|1|BB|G|738
4V66|1|BB|A|739
4V66|1|BB|C|740
4V66|1|BB|U|741
4V66|1|BB|A|742
4V66|1|BB|A|743
4V66|1|BB|U|744
4V66|1|BB|G|745
4V66|1|BB|U|746
4V66|1|BB|U|747
4V66|1|BB|G|748
4V66|1|BB|A|749
4V66|1|BB|A|750
4V66|1|BB|A|751
4V66|1|BB|A|752
4V66|1|BB|A|753
4V66|1|BB|U|754
4V66|1|BB|U|755
4V66|1|BB|A|756
4V66|1|BB|G|757
4V66|1|BB|C|758
4V66|1|BB|G|759
4V66|1|BB|G|760
4V66|1|BB|A|761
4V66|1|BB|U|762
4V66|1|BB|G|763
4V66|1|BB|A|764
4V66|1|BB|C|765
4V66|1|BB|U|766
4V66|1|BB|U|767

Current chains

Chain BB
23S rRNA

Nearby chains

Chain BL
50S ribosomal protein L22
Chain BN
50S ribosomal protein L2
Chain BT
50S ribosomal protein L32
Chain BV
50S ribosomal protein L34
Chain BY
50S ribosomal protein L3

Coloring options:

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