IL_4V66_081

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAAAG*CUC

Length

8 nucleotides

Bulged bases

4V66|1|BB|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V66_081 not in the Motif Atlas

Homologous match to IL_9DFE_043

Geometric discrepancy: 0.394

The information below is about IL_9DFE_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|1087
4V66|1|BB|A|1088
4V66|1|BB|A|1089
4V66|1|BB|A|1090
4V66|1|BB|G|1091
*
4V66|1|BB|C|1100
4V66|1|BB|U|1101
4V66|1|BB|C|1102

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B3

50S ribosomal protein L6

Chain B5

50S ribosomal protein L11

Chain BX

50S ribosomal protein L36