3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
CUAAG*CGAUG
Length
10 nucleotides
Bulged bases
4V66|1|BB|U|1379
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|BB|C|1351
4V66|1|BB|U|1352
4V66|1|BB|A|1353
4V66|1|BB|A|1354
4V66|1|BB|G|1355
*
4V66|1|BB|C|1376
4V66|1|BB|G|1377
4V66|1|BB|A|1378
4V66|1|BB|U|1379
4V66|1|BB|G|1380

Current chains

Chain BB
23S rRNA

Nearby chains

Chain BN
50S ribosomal protein L2
Chain BV
50S ribosomal protein L34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2131 s