IL_4V66_100

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

4V66|1|BB|C|1732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V66_100 not in the Motif Atlas

Geometric match to IL_7KGA_004

Geometric discrepancy: 0.2905

The information below is about IL_7KGA_004

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

4V66|1|BB|C|1727
4V66|1|BB|C|1728
*
4V66|1|BB|G|1731
4V66|1|BB|C|1732
4V66|1|BB|G|1733

Current chains

Chain BB

23S rRNA

Nearby chains