IL_4V66_111

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUUG*UGC

Length

7 nucleotides

Bulged bases

4V66|1|BB|U|2203

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V66_111 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.1984

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_61702.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

6

Unit IDs

4V66|1|BB|G|2201
4V66|1|BB|U|2202
4V66|1|BB|U|2203
4V66|1|BB|G|2204
*
4V66|1|BB|U|2220
4V66|1|BB|G|2221
4V66|1|BB|C|2222

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L2

Chain BS

50S ribosomal protein L31