IL_4V66_130

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

AAG*CU

Length

5 nucleotides

Bulged bases

4V66|1|A1|A|461

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V66_130 not in the Motif Atlas

Geometric match to IL_9AXU_106

Geometric discrepancy: 0.3936

The information below is about IL_9AXU_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

4V66|1|A1|A|460
4V66|1|A1|A|461
4V66|1|A1|G|462
*
4V66|1|A1|C|470
4V66|1|A1|U|471

Current chains

Chain A1

16S rRNA

Nearby chains