IL_4V66_148

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GACGUGCUAAUCUGCGAUAAGCG*CGAUUUC

Length

30 nucleotides

Bulged bases

4V66|1|BB|C|61, 4V66|1|BB|U|62, 4V66|1|BB|A|64, 4V66|1|BB|U|65, 4V66|1|BB|U|72, 4V66|1|BB|G|75, 4V66|1|BB|U|113

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|55
4V66|1|BB|A|56
4V66|1|BB|C|57
4V66|1|BB|G|58
4V66|1|BB|U|59
4V66|1|BB|G|60
4V66|1|BB|C|61
4V66|1|BB|U|62
4V66|1|BB|A|63
4V66|1|BB|A|64
4V66|1|BB|U|65
4V66|1|BB|C|66
4V66|1|BB|U|67
4V66|1|BB|G|68
4V66|1|BB|C|69
4V66|1|BB|G|70
4V66|1|BB|A|71
4V66|1|BB|U|72
4V66|1|BB|A|73
4V66|1|BB|A|74
4V66|1|BB|G|75
4V66|1|BB|C|76
4V66|1|BB|G|77
*
4V66|1|BB|C|109
4V66|1|BB|G|110
4V66|1|BB|A|111
4V66|1|BB|U|112
4V66|1|BB|U|113
4V66|1|BB|U|114
4V66|1|BB|C|115

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BM

50S ribosomal protein L23

Chain BQ

50S ribosomal protein L29

Chain BV

50S ribosomal protein L34