3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GGGGGUAG*CGAAUACC
Length
16 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|BB|G|855
4V66|1|BB|G|856
4V66|1|BB|G|857
4V66|1|BB|G|858
4V66|1|BB|G|859
4V66|1|BB|U|860
4V66|1|BB|A|861
4V66|1|BB|G|862
*
4V66|1|BB|C|915
4V66|1|BB|G|916
4V66|1|BB|A|917
4V66|1|BB|A|918
4V66|1|BB|U|919
4V66|1|BB|A|920
4V66|1|BB|C|921
4V66|1|BB|C|922

Current chains

Chain BB
23S rRNA

Nearby chains

Chain BA
5S ribosomal RNA; 5S rRNA
Chain BF
50S ribosomal protein L16
Chain BP
50S ribosomal protein L27
Chain BR
50S ribosomal protein L30

Coloring options:

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