IL_4V66_155

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CAAGG*CCCAAACCGACACAGGUGG

Length

24 nucleotides

Bulged bases

4V66|1|BB|A|1308, 4V66|1|BB|C|1607, 4V66|1|BB|A|1614, 4V66|1|BB|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|C|1306
4V66|1|BB|A|1307
4V66|1|BB|A|1308
4V66|1|BB|G|1309
4V66|1|BB|G|1310
*
4V66|1|BB|C|1605
4V66|1|BB|C|1606
4V66|1|BB|C|1607
4V66|1|BB|A|1608
4V66|1|BB|A|1609
4V66|1|BB|A|1610
4V66|1|BB|C|1611
4V66|1|BB|C|1612
4V66|1|BB|G|1613
4V66|1|BB|A|1614
4V66|1|BB|C|1615
4V66|1|BB|A|1616
4V66|1|BB|C|1617
4V66|1|BB|A|1618
4V66|1|BB|G|1619
4V66|1|BB|G|1620
4V66|1|BB|U|1621
4V66|1|BB|G|1622
4V66|1|BB|G|1623

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BL

50S ribosomal protein L22

Chain BM

50S ribosomal protein L23

Chain BV

50S ribosomal protein L34