IL_4V66_164

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAACGUUGAAGACGACGACGUUGAUAG*CUAAUGAAC

Length

36 nucleotides

Bulged bases

4V66|1|BB|U|2818, 4V66|1|BB|A|2820, 4V66|1|BB|C|2827, 4V66|1|BB|U|2833, 4V66|1|BB|U|2884, 4V66|1|BB|G|2885

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|2812
4V66|1|BB|A|2813
4V66|1|BB|A|2814
4V66|1|BB|C|2815
4V66|1|BB|G|2816
4V66|1|BB|U|2817
4V66|1|BB|U|2818
4V66|1|BB|G|2819
4V66|1|BB|A|2820
4V66|1|BB|A|2821
4V66|1|BB|G|2822
4V66|1|BB|A|2823
4V66|1|BB|C|2824
4V66|1|BB|G|2825
4V66|1|BB|A|2826
4V66|1|BB|C|2827
4V66|1|BB|G|2828
4V66|1|BB|A|2829
4V66|1|BB|C|2830
4V66|1|BB|G|2831
4V66|1|BB|U|2832
4V66|1|BB|U|2833
4V66|1|BB|G|2834
4V66|1|BB|A|2835
4V66|1|BB|U|2836
4V66|1|BB|A|2837
4V66|1|BB|G|2838
*
4V66|1|BB|C|2880
4V66|1|BB|U|2881
4V66|1|BB|A|2882
4V66|1|BB|A|2883
4V66|1|BB|U|2884
4V66|1|BB|G|2885
4V66|1|BB|A|2886
4V66|1|BB|A|2887
4V66|1|BB|C|2888

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BG

50S ribosomal protein L17

Chain BL

50S ribosomal protein L22

Chain BT

50S ribosomal protein L32

Chain BY

50S ribosomal protein L3