3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
UACAAAGA*UCAUAAAG
Length
16 nucleotides
Bulged bases
4V66|1|A1|U|1286
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|U|1247
4V66|1|A1|A|1248
4V66|1|A1|C|1249
4V66|1|A1|A|1250
4V66|1|A1|A|1251
4V66|1|A1|A|1252
4V66|1|A1|G|1253
4V66|1|A1|A|1254
*
4V66|1|A1|U|1283
4V66|1|A1|C|1284
4V66|1|A1|A|1285
4V66|1|A1|U|1286
4V66|1|A1|A|1287
4V66|1|A1|A|1288
4V66|1|A1|A|1289
4V66|1|A1|G|1290

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AG
30S ribosomal protein S14
Chain AU
30S ribosomal protein S7
Chain AW
30S ribosomal protein S9

Coloring options:

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