IL_4V66_188

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAAGGUUAAUUGAUG*UUGAUCGAAGCCC

Length

28 nucleotides

Bulged bases

4V66|1|BB|G|1884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|G|1846
4V66|1|BB|A|1847
4V66|1|BB|A|1848
4V66|1|BB|G|1849
4V66|1|BB|G|1850
4V66|1|BB|U|1851
4V66|1|BB|U|1852
4V66|1|BB|A|1853
4V66|1|BB|A|1854
4V66|1|BB|U|1855
4V66|1|BB|U|1856
4V66|1|BB|G|1857
4V66|1|BB|A|1858
4V66|1|BB|U|1859
4V66|1|BB|G|1860
*
4V66|1|BB|U|1882
4V66|1|BB|U|1883
4V66|1|BB|G|1884
4V66|1|BB|A|1885
4V66|1|BB|U|1886
4V66|1|BB|C|1887
4V66|1|BB|G|1888
4V66|1|BB|A|1889
4V66|1|BB|A|1890
4V66|1|BB|G|1891
4V66|1|BB|C|1892
4V66|1|BB|C|1893
4V66|1|BB|C|1894

Current chains

Chain BB

23S rRNA

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain AE

Transfer RNA; tRNA

Chain BN

50S ribosomal protein L2