IL_4V67_047
3D structure
- PDB id
- 4V67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a translation termination complex formed with release factor RF2.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCAGC*GG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V67_047 not in the Motif Atlas
- Geometric match to IL_4LFB_049
- Geometric discrepancy: 0.2378
- The information below is about IL_4LFB_049
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_15052.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 8
Unit IDs
4V67|1|AA|C|1128
4V67|1|AA|C|1129
4V67|1|AA|A|1130
4V67|1|AA|G|1131
4V67|1|AA|C|1132
*
4V67|1|AA|G|1142
4V67|1|AA|G|1143
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AI
- 30S ribosomal protein S9
Coloring options: