IL_4V67_345

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CU*AUAG*G

Length

7 nucleotides

Bulged bases

4V67|1|DA|U|2712, 4V67|1|DA|A|2713

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V67_345 not in the Motif Atlas

Geometric match to IL_4V9F_088

Geometric discrepancy: 0.1599

The information below is about IL_4V9F_088

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4V67|1|DA|C|2695
4V67|1|DA|U|2696
*
4V67|1|DA|A|2711
4V67|1|DA|U|2712
4V67|1|DA|A|2713
4V67|1|DA|G|2714
*
4V67|1|DA|G|2714

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DR

50S ribosomal protein L17

Chain DT

50S ribosomal protein L19