IL_4V68_026

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

GUGAAAGAC*GGGGAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|AA|G|604
4V68|1|AA|U|605
4V68|1|AA|G|606
4V68|1|AA|A|607
4V68|1|AA|A|608
4V68|1|AA|A|609
4V68|1|AA|G|610
4V68|1|AA|A|611
4V68|1|AA|C|612
*
4V68|1|AA|G|628
4V68|1|AA|G|629
4V68|1|AA|G|630
4V68|1|AA|G|631
4V68|1|AA|A|632
4V68|1|AA|G|633
4V68|1|AA|C|634

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AH

30S ribosomal protein S8

Chain AP

30S ribosomal protein S16

Chain AQ

30S ribosomal protein S17