IL_4V68_048

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|AA|C|1246
4V68|1|AA|U|1247
4V68|1|AA|A|1248
4V68|1|AA|C|1249
4V68|1|AA|A|1250
4V68|1|AA|A|1251
4V68|1|AA|A|1252
4V68|1|AA|G|1253
*
4V68|1|AA|C|1284
4V68|1|AA|A|1285
4V68|1|AA|A|1286
4V68|1|AA|A|1287
4V68|1|AA|A|1288
4V68|1|AA|A|1289
4V68|1|AA|G|1290
4V68|1|AA|G|1291

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14

Chain AU

30S ribosomal protein Thx