IL_4V68_082
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4V68|1|BA|G|776, 4V68|1|BA|A|788, 4V68|1|BA|A|789, 4V68|1|BA|C|790
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V68_082 not in the Motif Atlas
- Homologous match to IL_7RQB_023
- Geometric discrepancy: 0.0642
- The information below is about IL_7RQB_023
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.6
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V68|1|BA|G|775
4V68|1|BA|G|776
4V68|1|BA|A|777
*
4V68|1|BA|U|787
4V68|1|BA|A|788
4V68|1|BA|A|789
4V68|1|BA|C|790
4V68|1|BA|C|791
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B7
- 50S ribosomal protein L34
- Chain BD
- 50S ribosomal protein L2
- Chain BF
- 50S ribosomal protein L4
- Chain BW
- 50S ribosomal protein L22
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