IL_4V68_141

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|BA|G|2124
4V68|1|BA|G|2125
4V68|1|BA|A|2126
4V68|1|BA|G|2127
*
4V68|1|BA|C|2161
4V68|1|BA|G|2162
4V68|1|BA|C|2163
4V68|1|BA|C|2164
4V68|1|BA|G|2165
4V68|1|BA|G|2166
4V68|1|BA|U|2167
4V68|1|BA|G|2168
4V68|1|BA|A|2169
4V68|1|BA|A|2170
4V68|1|BA|A|2171
4V68|1|BA|U|2172
4V68|1|BA|C|2174

Current chains

Chain BA

23S rRNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BC

50S ribosomal protein L1