IL_4V68_174
3D structure
- PDB id
- 4V68 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.4 Å
Loop
- Sequence
- GGGAGC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V68_174 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.2265
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4V68|1|AA|G|774
4V68|1|AA|G|775
4V68|1|AA|G|776
4V68|1|AA|A|777
4V68|1|AA|G|778
4V68|1|AA|C|779
*
4V68|1|AA|G|803
4V68|1|AA|U|804
4V68|1|AA|C|805
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AK
- 30S ribosomal protein S11
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BD
- 50S ribosomal protein L2
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