IL_4V68_176

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

CGC*GGACUGCCCGCGAAAGCGGGAGGAAGGAG

Length

32 nucleotides

Bulged bases

4V68|1|AA|C|1172, 4V68|1|AA|A|1183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|AA|C|1116
4V68|1|AA|G|1117
4V68|1|AA|C|1118
*
4V68|1|AA|G|1155
4V68|1|AA|G|1156
4V68|1|AA|A|1157
4V68|1|AA|C|1158
4V68|1|AA|U|1159
4V68|1|AA|G|1160
4V68|1|AA|C|1161
4V68|1|AA|C|1162
4V68|1|AA|C|1163
4V68|1|AA|G|1164
4V68|1|AA|C|1165
4V68|1|AA|G|1166
4V68|1|AA|A|1168
4V68|1|AA|A|1169
4V68|1|AA|A|1170
4V68|1|AA|G|1171
4V68|1|AA|C|1172
4V68|1|AA|G|1173
4V68|1|AA|G|1174
4V68|1|AA|G|1175
4V68|1|AA|A|1176
4V68|1|AA|G|1177
4V68|1|AA|G|1178
4V68|1|AA|A|1179
4V68|1|AA|A|1180
4V68|1|AA|G|1181
4V68|1|AA|G|1182
4V68|1|AA|A|1183
4V68|1|AA|G|1184

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14