IL_4V69_060

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

GCCCG*CGUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_060 not in the Motif Atlas

Homologous match to IL_4LFB_057

Geometric discrepancy: 0.1338

The information below is about IL_4LFB_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V69|1|AA|G|1401
4V69|1|AA|C|1402
4V69|1|AA|C|1403
4V69|1|AA|C|1404
4V69|1|AA|G|1405
*
4V69|1|AA|C|1496
4V69|1|AA|G|1497
4V69|1|AA|U|1498
4V69|1|AA|A|1499
4V69|1|AA|A|1500
4V69|1|AA|C|1501

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AV

Transfer RNA; tRNA

Chain AX

mRNA

Chain BB

Large subunit ribosomal RNA; LSU rRNA