IL_4V69_145

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_145 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1874

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

4V69|1|BB|U|1864
4V69|1|BB|U|1865
4V69|1|BB|A|1866
4V69|1|BB|G|1867
*
4V69|1|BB|C|1874
4V69|1|BB|G|1875
4V69|1|BB|A|1876
4V69|1|BB|A|1877
4V69|1|BB|G|1878

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain B5

50S ribosomal protein L1