IL_4V69_168

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

4V69|1|BB|A|2572, 4V69|1|BB|C|2573

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_168 not in the Motif Atlas

Homologous match to IL_5J7L_341

Geometric discrepancy: 0.0999

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

4V69|1|BB|C|2512
4V69|1|BB|A|2513
*
4V69|1|BB|U|2571
4V69|1|BB|A|2572
4V69|1|BB|C|2573
4V69|1|BB|G|2574

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BJ

50S ribosomal protein L13