IL_4V69_175

3D structure

PDB id

4V69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex-bound E.coli 70S ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

4V69|1|BB|C|2712, 4V69|1|BB|U|2713

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V69_175 not in the Motif Atlas

Homologous match to IL_4WF9_103

Geometric discrepancy: 0.1561

The information below is about IL_4WF9_103

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

4V69|1|BB|U|2695
4V69|1|BB|U|2696
*
4V69|1|BB|A|2711
4V69|1|BB|C|2712
4V69|1|BB|U|2713
4V69|1|BB|G|2714

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BP

50S ribosomal protein L19